getPredictions: Calculate predicted gene expression based on estimated...

In haiyueliu/Eskrate: Estimate time-dependent RNA kinetics

Calculate predicted gene expression based on estimated kinetic rates (only alpha and gamma) using a simplified model.

Description

Calculate predicted gene expression based on estimated kinetic rates (only alpha and gamma) using a simplified model.

Usage

getPredictions(dataRates, threadN = 8)

Arguments

dataRates	a data frame with estimated time-dependent transcription (alpha) and degradation (gamma) rates
threadN	an integer the number of thread that used for calculation (default: 8)

Value

a data frame with predicted gene expression of m_u and m_total for genes in sorted cells.

Examples

prediction <- getPredictions(dataRates, threadN = 8)

haiyueliu/Eskrate documentation built on Sept. 3, 2023, 3:33 p.m.