load_bed: Load fragment data files or BED data files
In haizi-zh/bioessentials: Home-made essential tools for bioinformatics project
Description
Usage
Arguments
Details
Value
Description
Fragment data files are essentially BED data files. load_fragments and
load_bed will load these data files into data.table objects.
Usage
1
2
3
load_bed(file_path, region = NULL)
load_fragments(file_path, region = NULL)
Arguments
file_path
Path to the data file (in tab-separated values format, a.k.a "tsv").
region
Which genomic region to load. Can be either a character vector
following the UCSC convention, e.g. 21:1-9411192, or a
GenomicRanges::GRanges object. Default is NULL.
Details
If regions is not NULL, load_fragments will invoke tabix to load the data.
Value
A data.table object
haizi-zh/bioessentials documentation built on April 10, 2021, 2:34 p.m.
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Description Usage Arguments Details Value
Description
Fragment data files are essentially BED data files. load_fragments and
load_bed will load these data files into data.table objects.
Usage
1 2 3 | load_bed(file_path, region = NULL)
load_fragments(file_path, region = NULL)
|
Arguments
file_path |
Path to the data file (in tab-separated values format, a.k.a "tsv"). |
region |
Which genomic region to load. Can be either a character vector
following the UCSC convention, e.g. |
Details
If regions is not NULL, load_fragments will invoke tabix to load the data.
Value
A data.table object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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