ExonsCluster: Construct representative Exons

In hangost/IMAS: Integrative analysis of Multi-omics data for Alternative Splicing

Description

This function constructs representative Exons.

Usage

    ExonsCluster(ASdb,GTFdb,Ncor=1)

Arguments

ASdb	An ASdb object containing "SplicingModel" from the Splicingfinder funtion.
GTFdb	A TxDb object in the GenomicFeatures package.
Ncor	The number of cores for multi-threads function.

Value

ASdb containing representative exons.

Author(s)

Seonggyun Han, Younghee Lee

Examples

    sampleDB <- system.file("extdata", "sampleDB", package="IMAS")
    transdb <- loadDb(sampleDB)
    ## Not run: 
    ASdb <- Splicingfinder(transdb,Ncor=1)
    ASdb <- ExonsCluster(ASdb,transdb)
    
## End(Not run)

hangost/IMAS documentation built on May 17, 2019, 2:28 p.m.