GetPathwayEdgeData: Get the edge sets of pathways

Description Usage Details Value Author(s) Examples

View source: R/GetPathwayEdgeData.R

Description

Get the edge sets of pathways for the seven pathway database (KEGG; Biocarta; Reactome; NCI; SPIKE; HumanCyc; Panther).

Usage

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Details

The edge sets of pathways for the seven pathway database (KEGG; Biocarta; Reactome; NCI; SPIKE; HumanCyc; Panther) are obtained from the environment variable envData.

Value

A character vector, the length of this vector is the number of pathways.

Author(s)

Junwei Han <hanjunwei1981@163.com>, Xinrui Shi<xinrui103@163.com> and Chunquan Li <lcqbio@163.com>

Examples

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## Not run: 

#obtain the edge sets of pathways.
pathwayEdge.db<-GetPathwayEdgeData()


## End(Not run)

hanjunwei-lab/ESEA documentation built on July 5, 2020, 11:01 a.m.