PlotGlobEdgeCorProfile: Plot global edge correlation profile

In hanjunwei-lab/ESEA: ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis

Description

plot global edge correlation profile for differential correlation scores of edges

Usage

  PlotGlobEdgeCorProfile(EdgeCorScore)

Arguments

EdgeCorScore

A numeric vector. Each element is the differential correlation score of an edge.

Author(s)

Junwei Han <[e-mail]>, Xinrui Shi<[e-mail]> and Chunquan Li <[e-mail]>

Examples

## Not run: 

#get example data
dataset<-GetExampleData("dataset")
class.labels<-GetExampleData("class.labels")
controlcharactor<-GetExampleData("controlcharactor")

#get the data for background set of edges
edgesbackgrand<-GetEdgesBackgrandData()

#calculate the differential correlation score for edges
EdgeCorScore<-calEdgeCorScore(dataset, class.labels, controlcharactor, edgesbackgrand)

#plot global edge correlation profile
PlotGlobEdgeCorProfile(EdgeCorScore)


## End(Not run)

hanjunwei-lab/ESEA documentation built on July 5, 2020, 11:01 a.m.