README.md

In hansenjohnson/opcr: Process and Plot Data from an Optical Plankton Counter (OPC)

opcr

Process and plot data from an Optical Plankton Counter (OPC)

Overview

An Optical Plankton Counter (OPC) is an oceanographic instrument designed to count and size small particles in the water. The raw data are stored in a binary file format (typically with a .D00 file extension) designed by the manufacturer, Focal Technologies. This package provides utilities for reading in D00 files, converting them to a nice R format, and computing and plotting relevant metrics.

Installation and use

You can install the latest version of opcr from github as follows. I recommend building the vignettes as well so you can see some quick examples of how to use the package.

# install the latest version from github
devtools::install_github('hansenjohnson/opcr', build_vignettes = TRUE)
library(opcr)

# check out the vignette for simple examples
vignette('opcr')

Citation

Please cite as follows (update year and version as needed):

Johnson, HD (2021). opcr: process and plot data from an optical plankton counter, v1.0.0. Zenodo. DOI: 10.5281/zenodo.5760977

hansenjohnson/opcr documentation built on Jan. 24, 2023, 5:04 a.m.