Man pages for hansenjohnson/opcr
Process and Plot Data from an Optical Plankton Counter (OPC)
| bin | Bin numeric vector |
| convert_digital_size | Convert digital size |
| convert_single_opc | Convert OPC data |
| drop_volume | Drop volume |
| get_xlims | Get x axis limits from ggplot |
| get_ylims | Get y axis limits from ggplot |
| opc | Processed OPC downcast |
| opc_abundance | Calculate OPC abundance profile |
| opc_biomass | Calculate OPC biomass |
| opc_check | Check opc data |
| opc_energy | Calculate OPC energy |
| opc_flag | Flag bad data |
| opc_histogram | Calculate OPC size-frequency histogram |
| opc_image | Calculate OPC abundance in size and depth bin matrix |
| opc_plot_abundance | Compute and plot OPC abundance vs depth |
| opc_plot_attenuance | Plot OPC attenuance versus depth |
| opc_plot_biomass | Compute and plot OPC biomass vs depth |
| opc_plot_depth | Plot OPC time versus depth series |
| opc_plot_diagnostics | Plot a suite of OPC diagnostics |
| opc_plot_energy | Compute and plot OPC energy vs depth |
| opc_plot_flags | Plot OPC flags |
| opc_plot_histogram | Compute and plot OPC size vs abundance |
| opc_plot_image | Compute and plot image-style plot of OPC abundance in size... |
| opc_plot_multipanel | Plot OPC histogram, image, and profile with shared axes |
| opc_plot_time_count | Plot timeseries of OPC particle counts in given size range |
| opc_process | Process a single OPC cast |
| opc_process_benchtest | Benchtest a single OPC cast |
| opc_process_cruise | Process multiple OPC casts |
| opc_process_multicast | Process multiple OPC casts in single file |
| opcr | opcr |
| opc_speed | Calculate OPC speed |
| opc_time_count | Count OPC particles in given size range over time |
| opc_trim | Trim OPC cast |
| opc_trim_benchtest | Benchtest OPC cast |
| read_focal_opc | Read OPC raw data file |
| relabel | Relabel numeric bin |
