haowulab/DSS: Dispersion shrinkage for sequencing data

DSS is an R library performing differntial analysis for count-based sequencing data. It detectes differentially expressed genes (DEGs) from RNA-seq, and differentially methylated loci or regions (DML/DMRs) from bisulfite sequencing (BS-seq). The core of DSS is a new dispersion shrinkage method for estimating the dispersion parameter from Gamma-Poisson or Beta-Binomial distributions.

Getting started

Package details

AuthorHao Wu<hao.wu@emory.edu>, Hao Feng<hxf155@case.edu>
Bioconductor views DNAMethylation DifferentialExpression DifferentialMethylation GeneExpression RNASeq Sequencing
MaintainerHao Wu <hao.wu@emory.edu>, Hao Feng <hxf155@case.edu>
LicenseGPL
Version2.49.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("haowulab/DSS")
haowulab/DSS documentation built on Oct. 28, 2023, 6:59 p.m.