haowulab/Wind: Wind: weighted indexes for clustering evaluation

This package provide two new metrics for evaluating cell clustering results from single cell RNA-seq data: weighted Rand index (wRI) and weighted normalized mutual information (wNMI). The new metrics take into account the hierarchical structure of cell types in evaluating the clustering result.

Getting started

Package details

AuthorZhijin Wu <zhijin_wu@brown.edu>, Hao Wu <hao.wu@emory.edu>
Bioconductor views RNASeq Sequencing SingleCell
MaintainerZhijin Wu <zhijin_wu@brown.edu>, Hao Wu <hao.wu@emory.edu>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
haowulab/Wind documentation built on Nov. 4, 2019, 1:27 p.m.