bcbioBase-package | bcbioBase |
bcbioBaseTestsUrl | bcbioBase test data URL |
commands | Commands log parsing functions |
getGtfFileFromYaml | Get GTF file path from YAML |
getMetricsFromYaml | Get quality control metrics from YAML |
getSampleDataFromYaml | Get sample data from YAML |
importDataVersions | Import data versions |
importProgramVersions | Import program versions |
projectDir | Project directory |
projectDirPattern | Project directory grep pattern |
reexports | Objects exported from other packages |
runDate | Run date |
sampleDirs | Sample directories |
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