asw_stats: Get summary statistics of current taxonomy

In hcliedtke/AmphiNom: An Amphibian Systematics Tool

Get summary statistics of current taxonomy

Description

This function uses the ASW taxonomy table created with the function get_taxonomy() and summarizes counts of units per taxonomic level

Usage

asw_stats(
  asw_taxonomy = AmphiNom::asw_taxonomy,
  verbose = F,
  Order = NA,
  Superfamily = NA,
  Family = NA,
  Subfamily = NA,
  Genus = NA
)

Arguments

asw_taxonomy	output of the function get_taxonomy() default will take AmphiNom's internally stored version, which might be outdated
verbose	logical arguments can be turned on to summarize at given taxonomic levels or to give numbers of each unit per taxonomic level. default is switched off (FALSE)
Order	string to specify summary statistics of only a specific order
Superfamily	string to specify summary statistics of only a specific superfamily
Family	string to specify summary statistics of only a specific Family
Subfamily	string to specify summary statistics of only a specific subfamily
Genus	string to specify summary statistics of only a specific genus

Details

One logical arguments can be turned on to summarize at given taxonomic levels or to give numbers of each unit per taxonomic level

Value

returns either a data frame or list of summary statitics

Examples

asw_stats()
asw_stats(verbose=TRUE, Family="Rhacophoridae")

hcliedtke/AmphiNom documentation built on Nov. 8, 2024, 8:10 a.m.