synonym_report: Get summary report of "synced" query

In hcliedtke/AmphiNom: An Amphibian Systematics Tool

Get summary report of "synced" query

Description

This function produces a report of an undertaken aswSync() query

Usage

synonym_report(query_info, verbose = F)

Arguments

query_info	output of the function asw_sync()
verbose	logical arguments can be turned on to list species which result in conflict. Default=FALSE

Details

One logical arguments can be turned on to summarize in terms of numbers of cases, or to provide species names of conflicting issues.

Value

returns either a data frame or list of summary statitics

Examples

#check out amphibiaweb taxonomy and extract only Bufonidae
head(amphweb$species)
amphweb_bufonidae<-amphweb[amphweb$family=="Bufonidae",]
#query bufonidae against ASW database and inspect
bufonidae_asw<-asw_sync(query=amphweb.bufonidae$species)
synonym_report(bufonidae_asw)

hcliedtke/AmphiNom documentation built on Nov. 8, 2024, 8:10 a.m.