driver: Functions for detecting driver mutations
In heavywatal/cellpoptime: Analyze and visualize phylogenetic tree of cell population
Description
Usage
Arguments
Details
Description
Functions for detecting driver mutations
Usage
1
2
3
4
5
detect_driver(v)
filter_origins(x, method = "fdr", q = 0.05)
mutant_labels(x)
Arguments
v
a pair of branch lengths (number of mutations)
x
scaled tbl_tree
method
passed to p.adjust()
q
threshold
Details
detect_driver returns a vector of p-values.
filter_origins filters candidate origins by adjusted p-values.
mutant_labels extracts mutated nodes in tbl_tree
heavywatal/cellpoptime documentation built on May 5, 2021, 7:16 p.m.
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Description Usage Arguments Details
Description
Functions for detecting driver mutations
Usage
1 2 3 4 5 | detect_driver(v)
filter_origins(x, method = "fdr", q = 0.05)
mutant_labels(x)
|
Arguments
v |
a pair of branch lengths (number of mutations) |
x |
scaled tbl_tree |
method |
passed to |
q |
threshold |
Details
detect_driver returns a vector of p-values.
filter_origins filters candidate origins by adjusted p-values.
mutant_labels extracts mutated nodes in tbl_tree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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