logo: Logo plot
In heike/gglogo: Geom for Logo Sequence Plots
logo R Documentation
Logo plot
Description
Simple logo plot of sequences. For more complicated sequence logos, such as with treatment comparisons or subsets see geom_logo.
Usage
logo(sequences)
Arguments
sequences
vector of text sequences, for which consensus logo is to be shown
Value
ggplot2 object for simple sequence
Examples
data(sequences)
library(ggplot2)
library(RColorBrewer)
cols <- rep(brewer.pal(12, name="Paired"),22)
logo(sequences$peptide) + aes(fill=element) + scale_fill_manual(values=cols)
heike/gglogo documentation built on Feb. 3, 2024, 1:45 p.m.
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| logo | R Documentation |
Logo plot
Description
Simple logo plot of sequences. For more complicated sequence logos, such as with treatment comparisons or subsets see geom_logo.
Usage
logo(sequences)
Arguments
sequences |
vector of text sequences, for which consensus logo is to be shown |
Value
ggplot2 object for simple sequence
Examples
data(sequences)
library(ggplot2)
library(RColorBrewer)
cols <- rep(brewer.pal(12, name="Paired"),22)
logo(sequences$peptide) + aes(fill=element) + scale_fill_manual(values=cols)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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