compute_concordance: Compute the concordance scores of nodes in a network

In heimannch/abcnet: Compute scores of an abundant-concordant cytokine network

Description

Compute the concordance scores of nodes in a network

Usage

compute_concordance(scaffold, nodes_info)

Arguments

scaffold	A dataframe with a scaffold interaction in each row. Columns should be named "From" and "To".
nodes_info	A dataframe with the ternary bins for each node and the ratio of samples in each group that map to the two upper tertiles. Use the output dataframe from compute_abundance function.

Value

A dataframe with the concordance score for each edge in the scaffold.

heimannch/abcnet documentation built on Jan. 2, 2021, 5:06 p.m.