R/data.R

In helen307/phyMSAViewer: Provide Phylogenetic tree and MSA visualization from Uniprot IDs

#' Sequences read from fasta file
#'
#' A dataset that contains sequences from ten uniprot IDs, and was read from a fasta file. All the sequences are randomly selected homo sapiens.
#'
#'  @format A AAStringSet of length 10, length of the strings varies:
#'  \describe{
#'    \item{NAMES}{Species name of each sequence (homo sapiens), in characters}
#'    \item{start}{The start index of each sequence, in integers}
#'    \item{width}{The length of each sequence, in integers}
#'  }
#'
#' @source \url{https://www.uniprot.org}
#' @source \url{https://www.uniprot.org/uniprot/O95644}
#' @source \url{https://www.uniprot.org/uniprot/O95644}
#' @source \url{https://www.uniprot.org/uniprot/Q12968}
#' @source \url{https://www.uniprot.org/uniprot/Q14934}
#' @source \url{https://www.uniprot.org/uniprot/O94916}
#' @source \url{https://www.uniprot.org/uniprot/P19838}
#' @source \url{https://www.uniprot.org/uniprot/Q00653}
#' @source \url{https://www.uniprot.org/uniprot/Q01201}
#' @source \url{https://www.uniprot.org/uniprot/Q04864}
#' @source \url{https://www.uniprot.org/uniprot/Q04206}
#'
#' @references
#'  1. UniProt Consortium. (2015). UniProt: a hub for protein information. Nucleic acids research, 43(D1), D204-D212.
"mySeqs"