read.fasta: Read fasta file
In helixcn/seqRFLP: Simulation and visualization of restriction enzyme cutting pattern from DNA sequences.
Description
Usage
Arguments
Details
Value
Note
Author(s)
References
See Also
Examples
Description
Read fasta file from a specified file path or URL.
Usage
1
read.fasta(file = NULL)
Arguments
file
A character string naming the file path.
Details
Read fasta file from a specified file path (usually local machine) or URL.
Value
Returns a fasta object stored as a vector of character strings.
Note
To add.
Author(s)
Jinlong zhang jinlongzhang01@gmail.com
References
None.
See Also
See Also read.phy, read.nxs for importing data from other data types.
Examples
1
2
3
4
5
6
7
8
9
10
### read.fasta() example
###
cat(
">No305",
"NTTCGAAAAACACACCCACTACTAAAANTTATCAGTCACT",
file = "dna1.fas", sep = "\n")
sequences <- read.fasta("dna1.fas")
unlink("dna1.fas")
helixcn/seqRFLP documentation built on May 17, 2019, 3:37 p.m.
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Description Usage Arguments Details Value Note Author(s) References See Also Examples
Description
Read fasta file from a specified file path or URL.
Usage
1 | read.fasta(file = NULL)
|
Arguments
file |
A character string naming the file path. |
Details
Read fasta file from a specified file path (usually local machine) or URL.
Value
Returns a fasta object stored as a vector of character strings.
Note
To add.
Author(s)
Jinlong zhang jinlongzhang01@gmail.com
References
None.
See Also
See Also read.phy, read.nxs for importing data from other data types.
Examples
1 2 3 4 5 6 7 8 9 10 | ### read.fasta() example
###
cat(
">No305",
"NTTCGAAAAACACACCCACTACTAAAANTTATCAGTCACT",
file = "dna1.fas", sep = "\n")
sequences <- read.fasta("dna1.fas")
unlink("dna1.fas")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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