Files in helloicyvodka/ggVITA
An R package for VIsualization and annotation of Tree Alignment.
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/DELTA.R
R/DrawScoreMatrix.R
R/Find-addNode.R
R/Find-missed-mother.R
R/Find-missed-sister.R
R/Find-root-from-tips.R
R/Find-root.R
R/Find-tips.R
R/Find-tree-from-tips.R
R/Find-unpaired-tips.R
R/LN_to_Bin.R
R/Make-tree-complete.R
R/NA-expr-df-omit.R
R/ReLin.R
R/add_pruning_length.R
R/ggvita-classic.R
R/ggvita.R
R/plot-construction.R
R/print-ggvita.R
R/readal-almg.R
R/readal-alml.R
R/readal-epic.R
R/readal.R
R/recale_from_bottom.R
R/relin2.R
R/rm_tail_blank_line.R
R/stat_epic.R
R/stat_prune.R
R/theme_al.R
R/to_phylo-alml.R
R/to_phylo-tr.R
R/utils.R
R/write-alm.R
README.md
data/DELTA
data/all_cells.rda
data/alml_list.rda
data/fun.alm
data/fun.alml
data/stat_epic_example.rda
ggvita.Rproj
man/Bin2Dec.Rd
man/Bin_get_parent.Rd
man/DELTA.Rd
man/Dec2Bin.Rd
man/DrawScoreMatrix.Rd
man/DrawScoreMatrix2.Rd
man/Find.addNode.Rd
man/Find.missed.sister.Rd
man/Find.root.Rd
man/Find.root.from.tips.Rd
man/Find.tips.Rd
man/Find.tree.from.tips.Rd
man/Find.unpaired.tip.Rd
man/LN_to_Bin.Rd
man/Make.tree.complete.Rd
man/ReLin.Rd
man/ggvita.Rd
man/ggvita.classic.Rd
man/ggvita_add.Rd
man/print.ggvita.Rd
man/readal.Rd
man/readal.almg.Rd
man/readal.alml.Rd
man/readal.epic.Rd
man/sort_Bin_by_Dec.Rd
man/stat_epic.Rd
man/stat_prune.Rd
man/theme_al.Rd
man/write.alm.Rd
packrat/packrat.opts
vignettes/ggvita.Rmd
