Man pages for hezijin/conservedPos
Use conservedPos find important conserved sites for small target region

conservityTableThis function calculates the conservity of all positions for...
createPosVecFind most conserved nucleotide in each position and its...
findConservedNulThis function finds the nucleotide that has highest frequency...
findConservityFromSThis function finds the highest frequency of nucleotide in...
findMaxLenThis function finds the max length of sequence for input...
plotOverallPlot the conservity of the positions
plotPartialThis function plots the conservity for selected alignment...
runconservedPosLaunch Shiny App for conservedPos
testSeqShortA set of sequences for testing
testSeqUnequalA set of sequences for testing
hezijin/conservedPos documentation built on Jan. 1, 2021, 3:18 a.m.