NEWS.md

In hhhh5/ewastools: EWAS Tools

ewastools 1.7.2

• Added support for EPICv2 chip

ewastools 1.7.1

• Added HRS cell composition model

ewastools 1.7

• Saliva cell composition prediction
• Test detectionP.minfi for compatibility
• Drop normalize

ewastools 1.6

• read_idats: extract Sentrix barcode and position from .idat files, stored in meta data.table (92eb8df289a473fa0c06471be197db1953e39efd0)
• call_genotypes: use pre-specified parameters for SNP mixture model by default, i.e., learn=FALSE (507abceeb8db572d72089e423678f3cd5a7f6769)
• Update recommedation of pre-processing workflow: call mask() after check_sex() (eb54d1b0d74d2b0231db6e03a8c60710abd42e09)
• Add some unit tests
• Fix: some bisulfite conversion control probes were ignored due to inconsistent naming (24233ffcbea4337b9a7d4d3060b03b484d5ba01c)

hhhh5/ewastools documentation built on Feb. 7, 2024, 6:21 p.m.