pcxn_gene_members: Acquire the gene members of a pathway from the pcxnData...

Description Usage Arguments Value Author(s) Examples

Description

Acquire the gene members of one of the available pathways that belong to MSigDB H hallmark pathways, MSigDB C2 Canonical pathways, MSigDB C5 GO BP gene sets or Pathprint genesets

Usage

1
pcxn_gene_members(pathway_name = "Alzheimer's disease (KEGG)")

Arguments

pathway_name

the pathway whose members we want

Value

a matrix of Entrez IDs and gene symbols

Author(s)

Sokratis Kariotis

Examples

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2
# Get the members of a single pathway
pcxn_gene_members("Alzheimer's disease (KEGG)")

hidelab/pcxn documentation built on May 21, 2019, 3:03 a.m.