Files in hloefflerwirth/scrat

Single Cell - R Analysis Toolbox

DESCRIPTION

NAMESPACE

NEWS

R/RcppExports.R R/biomart_available.r R/calc_statistics.r R/check_input_parameters.r R/color_scheme.r R/create_metacell.r R/detect_ensembl_dataset.r R/detect_spots_integral.r R/detect_spots_samples.r R/geneset_analysis.r R/geneset_statistic_integral.r R/geneset_statistic_samples.r R/get_running_average.r R/get_statistic.r R/group_analyses.r R/group_assignment.r R/heatmaps.r R/html_summary.r R/modules_CSV.r R/modules_reports.r R/pat_assignment.r R/prepare_annotation.r R/primary_analysis.r R/pseudotime_estimation.r R/pseudotime_report.r R/quantile_normalization.r R/sample_expression_portraits.r R/sample_similarity_analysis_ED.r R/sample_similarity_analysis_ICA.r R/sample_similarity_analysis_cor.r R/scrat.r R/seuratPreprocessing.r R/som.linear.init.r R/som.training.r R/summary_sheets_groups.r R/summary_sheets_modules.r R/summary_sheets_samples.r R/summary_sheets_seurat.r R/util.r README.md

data/macro.data.Seurat.RData

data/macro.data.counts.RData

data/scrat.genesets.RData

inst/CITATION

man/macro.data.Seurat.Rd man/macro.data.counts.Rd man/scrat-package.Rd man/scrat.genesets.Rd man/scrat.new.Rd man/scrat.run.Rd

src/DeltaMatrix.cpp

src/DistanceCalculator.cpp

src/Makevars

src/Makevars.win

src/NeighborhoodMatrix.cpp

src/RcppExports.cpp

vignettes/Block1.pdf vignettes/Block2.pdf vignettes/Block3.pdf vignettes/Block4.pdf vignettes/Block5.pdf vignettes/HTML.pdf vignettes/SizeRecommendation.pdf vignettes/Summary.pdf

vignettes/Thumbs.db

vignettes/Vignette.Rnw

vignettes/scrat.bib

hloefflerwirth/scrat documentation built on Sept. 2, 2022, 4:09 a.m.