select.ncomponents: Estimate number of components with reflected property and...
In hms-dbmi/spacemut: Analysis of spatial mutation patterns.
Description
Usage
Arguments
Value
Description
Estimate number of components with reflected property and processes for different input extracted components
Usage
1
2
select.ncomponents(rate, n.min = 2, n.max = 30, cutoff = 0.8,
n.cores = 1)
Arguments
rate
matrix of mutation rates of mutation types in genomic windows
n.min
min number of components to extract
n.max
max number of components to extract
cutoff
cutoff on reflection property
n.cores
nunmber of cores to use
Value
number of components (with reflection property) and processes per each input number of extracted components
hms-dbmi/spacemut documentation built on Feb. 8, 2021, 6:27 a.m.
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Description Usage Arguments Value
Description
Estimate number of components with reflected property and processes for different input extracted components
Usage
1 2 | select.ncomponents(rate, n.min = 2, n.max = 30, cutoff = 0.8,
n.cores = 1)
|
Arguments
rate |
matrix of mutation rates of mutation types in genomic windows |
n.min |
min number of components to extract |
n.max |
max number of components to extract |
cutoff |
cutoff on reflection property |
n.cores |
nunmber of cores to use |
Value
number of components (with reflection property) and processes per each input number of extracted components
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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