as_cor_network: Coerce to a cor_network object

In houyunhuang/ggcor: Extended tools for correlation analysis and visualization

Description

Functions to coerce a object to cor_network if possible.

Usage

as_cor_network(x, ...)

## S3 method for class 'cor_tbl'
as_cor_network(
  x,
  directed = FALSE,
  simplify = TRUE,
  weight = NULL,
  r.thres = 0.6,
  r.abs = TRUE,
  p.thres = 0.05,
  ...
)

## S3 method for class 'mantel_tbl'
as_cor_network(x, directed = FALSE, ...)

## S3 method for class 'pro_tbl'
as_cor_network(x, directed = FALSE, ...)

## S3 method for class 'correlate'
as_cor_network(x, directed = FALSE, ...)

## S3 method for class 'rcorr'
as_cor_network(x, directed = FALSE, ...)

## S3 method for class 'corr.test'
as_cor_network(x, directed = FALSE, ...)

## S3 method for class 'igraph'
as_cor_network(x, ...)

## S3 method for class 'tbl_graph'
as_cor_network(x, ...)

## Default S3 method:
as_cor_network(x, ...)

Arguments

x	any R object.
...	extra params passing to cor_network.
directed	logical value, whether or not to create a directed graph.
simplify	logical value (defaults to TRUE) indicating whether to delete nodes without edge connections.
weight	NULL (default) or name of column in edges which will be renamed to "weight".
r.thres	a numeric value.
r.abs	logical value (defaults to TRUE).
p.thres	a numeric value.

Value

a cor_network object.

Author(s)

Houyun Huang, Lei Zhou, Jian Chen, Taiyun Wei

Examples

ll <- correlate(mtcars)
as_cor_network(ll)

houyunhuang/ggcor documentation built on July 22, 2020, 8:31 p.m.