distcompSetup: Setup a workspace and configuration for a distributed...

View source: R/distcomp.R

distcompSetupR Documentation

Setup a workspace and configuration for a distributed computation

Description

The function distcompSetup sets up a distributed computation and configures some global parameters such as definition file names, data file names, instance object file names, and ssl configuration parameters. The function creates some of necessary subdirectories if not already present and throws an error if the workspace areas are not writeable

Usage

distcompSetup(
  workspacePath = "",
  defnPath = paste(workspacePath, "defn", sep = .Platform$file.sep),
  instancePath = paste(workspacePath, "instances", sep = .Platform$file.sep),
  defnFileName = "defn.rds",
  dataFileName = "data.rds",
  instanceFileName = "instance.rds",
  resultsCacheFileName = "results_cache.rds",
  ssl_verifyhost = 1L,
  ssl_verifypeer = 1L
)

Arguments

workspacePath

a folder specifying the workspace path. This has to be writable by the opencpu process. On a cloud opencpu server on Ubuntu, for example, this requires a one-time modification of apparmor profiles to enable write permissions to this path

defnPath

the path where definition files will reside, organized by computation identifiers

instancePath

the path where instance objects will reside

defnFileName

the name for the compdef definition files

dataFileName

the name for the data files

instanceFileName

the name for the instance files

resultsCacheFileName

the name for the instance results cache files for HE computations

ssl_verifyhost

integer value, usually 1L, but for testing with snake-oil certs, one might set this to 0L

ssl_verifypeer

integer value, usually 1L, but for testing with snake-oil certs, one might set this to 0L

Value

TRUE if all is well

See Also

getConfig()

Examples

## Not run: 
distcompSetup(workspacePath="./workspace")

## End(Not run)

hrpcisd/distcomp documentation built on Feb. 14, 2023, 4:56 p.m.