Files in humburg/tileHMM
Hidden Markov Models for ChIP-on-Chip Analysis
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/dist.R
R/hmm.R
R/utils.R
README.md
data/datalist
data/simChIP.rda
inst/CITATION
inst/COPYING
inst/doc/tileHMM.pdf
man/baumWelch.Rd
man/contDist-class.Rd
man/contHMM-access.Rd
man/contHMM-class.Rd
man/discDist-class.Rd
man/dist-access.Rd
man/dist-class.Rd
man/forward.Rd
man/generate.data.Rd
man/getHMM.Rd
man/gff2index.Rd
man/hmm-class.Rd
man/hmm.setup.Rd
man/initializeDist-methods.Rd
man/initializeHMM-methods.Rd
man/internals.Rd
man/logSum.Rd
man/plot.Rd
man/posterior.Rd
man/reg2gff.Rd
man/region.length.Rd
man/region.position.Rd
man/remove.short.Rd
man/sampleObs.Rd
man/sampleSeq.Rd
man/shrinkt.st.Rd
man/simChIP.Rd
man/states.Rd
man/tDist-class.Rd
man/tileHMM-package.Rd
man/viterbi.Rd
man/viterbiEM.Rd
man/viterbiTraining.Rd
src/tilehmm_lib.c
src/tilehmm_lib.h
tileHMM.Rproj
vignettes/tileHMM.Rnw
