hummelma/TEQC: Quality control for target capture experiments
Target capture experiments combine hybridization-based (in solution or on microarrays) capture and enrichment of genomic regions of interest (e.g. the exome) with high throughput sequencing of the captured DNA fragments. This package provides functionalities for assessing and visualizing the quality of the target enrichment process, like specificity and sensitivity of the capture, per-target read coverage and so on.
Getting started
Browse package contents
Package details |
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| Author | M. Hummel, S. Bonnin, E. Lowy, G. Roma |
| Bioconductor views | Genetics Microarray QualityControl Sequencing |
| Maintainer | Sarah Bonnin <Sarah.Bonnin@crg.eu> |
| License | GPL (>= 2) |
| Version | 4.13.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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