hyunjimoon/SBC
Simulation Based Calibration for Bayesian models

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254
Source code
26
Man pages
61
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hyunjimoon/SBC: Simulation Based Calibration for Bayesian models
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API

API for hyunjimoon/SBC
Simulation Based Calibration for Bayesian models

Global functions
.onLoad Source code
SBC-deprecated Man page
SBC_backend_brms Man page Source code
SBC_backend_brms_from_generator Man page Source code
SBC_backend_cmdstan_sample Man page Source code
SBC_backend_cmdstan_variational Man page Source code
SBC_backend_default_thin_ranks Man page Source code
SBC_backend_default_thin_ranks.SBC_backend_brms Source code
SBC_backend_default_thin_ranks.default Man page Source code
SBC_backend_hash_for_cache Man page Source code
SBC_backend_hash_for_cache.SBC_backend_brms Source code
SBC_backend_hash_for_cache.SBC_backend_cmdstan_sample Source code
SBC_backend_hash_for_cache.SBC_backend_cmdstan_variational Source code
SBC_backend_hash_for_cache.SBC_backend_rjags Source code
SBC_backend_hash_for_cache.SBC_backend_rstan_optimizing Source code
SBC_backend_hash_for_cache.SBC_backend_rstan_sample Source code
SBC_backend_hash_for_cache.default Source code
SBC_backend_iid_draws Man page Source code
SBC_backend_iid_draws.SBC_backend_brms Source code
SBC_backend_iid_draws.SBC_backend_cmdstan_variational Source code
SBC_backend_iid_draws.SBC_backend_mock_rng Source code
SBC_backend_iid_draws.SBC_backend_rstan_optimizing Source code
SBC_backend_iid_draws.default Man page Source code
SBC_backend_mock Man page Source code
SBC_backend_mock_rng Source code
SBC_backend_rjags Man page Source code
SBC_backend_rstan_optimizing Man page Source code
SBC_backend_rstan_sample Man page Source code
SBC_datasets Man page Source code
SBC_diagnostic_messages Source code
SBC_error Source code
SBC_example_backend Man page Source code
SBC_example_generator Man page Source code
SBC_example_results Man page Source code
SBC_fit Man page Source code
SBC_fit.SBC_backend_brms Source code
SBC_fit.SBC_backend_cmdstan_sample Source code
SBC_fit.SBC_backend_cmdstan_variational Source code
SBC_fit.SBC_backend_mock Source code
SBC_fit.SBC_backend_mock_rng Source code
SBC_fit.SBC_backend_rjags Source code
SBC_fit.SBC_backend_rstan_optimizing Source code
SBC_fit.SBC_backend_rstan_sample Source code
SBC_fit_to_diagnostics Man page Source code
SBC_fit_to_diagnostics.CmdStanMCMC Source code
SBC_fit_to_diagnostics.CmdStanVB Source code
SBC_fit_to_diagnostics.RStanOptimizingFit Source code
SBC_fit_to_diagnostics.brmsfit Source code
SBC_fit_to_diagnostics.default Source code
SBC_fit_to_diagnostics.stanfit Source code
SBC_fit_to_draws_matrix Man page Source code
SBC_fit_to_draws_matrix.CmdStanMCMC Source code
SBC_fit_to_draws_matrix.CmdStanVB Source code
SBC_fit_to_draws_matrix.RStanOptimizingFit Source code
SBC_fit_to_draws_matrix.SBC_rjags_fit Source code
SBC_fit_to_draws_matrix.brmsfit Source code
SBC_fit_to_draws_matrix.default Man page Source code
SBC_generator_brms Man page Source code
SBC_generator_custom Man page Source code
SBC_generator_function Man page Source code
SBC_print_example_model Man page Source code
SBC_results Man page Source code
SBC_statistics_from_single_fit Man page Source code
[.SBC_datasets Man page
[.SBC_results Man page
`[.SBC_datasets` Source code
`[.SBC_results` Source code
adjust_gamma Source code
adjust_gamma_optimize Source code
adjust_gamma_simulate Source code
alpha_quantile Source code
bind_datasets Man page Source code
bind_derived_quantities Man page Source code
bind_generated_quantities Man page Source code
bind_generated_quantities-deprecated Man page
bind_globals Man page Source code
bind_results Man page Source code
brms_full_ppred Man page Source code
brms_response_sequence Man page Source code
brms_response_sequence.bform Source code
brms_response_sequence.brmsfit Source code
brms_response_sequence.brmsterms Source code
brms_response_sequence.btl Source code
brms_response_sequence.mvbrmsterms Source code
brmsfit_from_stanfit Source code
calculate_prior_sd Man page Source code
calculate_ranks_draws_matrix Man page Source code
calculate_sds_draws_matrix Source code
capture_all_outputs Source code
check_all_SBC_diagnostics Man page Source code
check_all_SBC_diagnostics.SBC_results Man page Source code
check_all_SBC_diagnostics.default Man page Source code
check_stats Source code
combine_all_variables Man page Source code
combine_args Man page Source code
combine_array_elements Man page Source code
compute_SBC Man page Source code
compute_SBC_single Source code
compute_default_diagnostics Source code
compute_dquants Man page Source code
compute_gen_quants Man page Source code
compute_gen_quants-deprecated Man page
compute_results Man page Source code
compute_results-deprecated Man page
data_for_ecdf_plots Man page Source code
data_for_ecdf_plots.SBC_results Source code
data_for_ecdf_plots.data.frame Source code
data_for_ecdf_plots.matrix Source code
default_chunk_size Man page Source code
default_cores_per_fit Man page Source code
derived_quantities Man page Source code
draws_rvars_to_standata Source code
draws_rvars_to_standata_single Source code
ecdf_intervals Source code
empirical_coverage Man page Source code
empirical_pit Source code
generate_datasets Man page Source code
generate_datasets.SBC_generator_brms Source code
generate_datasets.SBC_generator_custom Source code
generate_datasets.SBC_generator_function Source code
generated_quantities Man page Source code
generated_quantities-deprecated Man page
get_diagnostic_messages Man page Source code
get_diagnostic_messages.SBC_ADVI_diagnostics Source code
get_diagnostic_messages.SBC_ADVI_diagnostics_summary Source code
get_diagnostic_messages.SBC_RStanOptimizing_diagnostics Source code
get_diagnostic_messages.SBC_RStanOptimizing_diagnostics_summary Source code
get_diagnostic_messages.SBC_nuts_diagnostics Source code
get_diagnostic_messages.SBC_nuts_diagnostics_summary Source code
get_diagnostic_messages.SBC_results Source code
get_diagnostic_messages.SBC_results_summary Source code
get_diagnostic_messages.default Man page Source code
get_expected_max_rhat Source code
guess_rank_hist_bins Man page Source code
length.SBC_datasets Source code
length.SBC_results Source code
new_SBC_backend_brms Source code
new_SBC_datasets Source code
nodes_by_depth Source code
p_interior Source code
plot_contraction Man page Source code
plot_contraction.SBC_results Source code
plot_contraction.data.frame Source code
plot_coverage Man page Source code
plot_coverage.SBC_results Source code
plot_coverage.data.frame Source code
plot_coverage_diff Man page Source code
plot_coverage_diff.SBC_results Source code
plot_coverage_diff.data.frame Source code
plot_ecdf Man page Source code
plot_ecdf_diff Man page Source code
plot_rank_hist Man page Source code
plot_rank_hist.SBC_results Source code
plot_rank_hist.data.frame Source code
plot_sim_estimated Man page Source code
plot_sim_estimated.SBC_results Source code
plot_sim_estimated.data.frame Source code
print.SBC_diagnostic_messages Source code
print.SBC_nuts_diagnostics_summary Source code
print.SBC_results_summary Source code
ranks_to_empirical_pit Source code
rdunif Man page Source code
recompute_SBC_statistics Man page Source code
recompute_statistics Man page Source code
recompute_statistics-deprecated Man page
reemit_captured Source code
require_brms_version Source code
require_cmdstanr_version Source code
require_package_version Source code
sampling_backend_from_stanmodel Source code
stan_variational_elbo_converged Source code
stanmodel_for_brms Source code
summary.SBC_ADVI_diagnostics Source code
summary.SBC_RStanOptimizing_diagnostics Source code
summary.SBC_nuts_diagnostics Source code
summary.SBC_results Source code
translate_rstan_args_to_cmdstan Source code
u_scale Source code
validate_SBC_backend_brms_args Source code
validate_SBC_datasets Source code
validate_SBC_results Source code
validate_derived_quantities Man page Source code
validate_diagnostic_messages Source code
validate_generated_quantities Man page Source code
variational_backend_from_stanmodel Source code
write_stan_file_simple Source code
hyunjimoon/SBC documentation built on Feb. 17, 2025, 3:25 a.m.

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