Description Usage Arguments Details Author(s) References
Display the map of pairwise overlap measures of Maitra and Melnykov (JCGS, 2012)
1 2 3 | overlap.map(overlap.mat, map.col = c("#FFFFD9","#EDF8B1","#C7E9B4","#7FCDBB",
"#41B6C4","#1D91C0","#225EA8","#253494","#081D58"), linescol = "magenta",
map.range = NULL, lab.col = 1, lab.cex = 0.95, map.cex = 0.85, legend.cex = 1)
|
overlap.mat |
matrix of total pairwise overlaps (necessarily symmetric) |
map.col |
colormap for the mapping. Default is Green to Blue palette from RColorBrewer |
linescol |
color for the lines drawing the squares |
map.range |
range of the overlap map (default: minimum and maximum of lower triangle of the matrix) |
lab.col |
color of the labels (same as nrow(matrix) if provided) |
lab.cex |
character size of the label |
map.cex |
character size of the overlap values laid on the map |
legend.cex |
character size of the legend text (does not work always) |
Provides map of overlap values for each group of mixture model.
Israel Almodóvar-Rivera and Ranjan Maitra.
Maitra, R. (2010). A re-defined and generalized percent-overlap-of-activation measure for studies of fMRI reproducibility and its use in identifying outlier activation maps. Neuroimage, 50(1), 124-135.
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