GEOData-class: Class "GEOData"

In ian1roberts/GEOquery: Get data from NCBI Gene Expression Omnibus (GEO)

Description

A virtual class for holding GEO samples, platforms, and datasets

Objects from the Class

Objects can be created by calls of the form new("GEOData", ...).

Slots

header:

Object of class "list" containing metadata

Methods

Accession

signature(object = "GEOData"): returns the GEO acccession for the current object

Columns

signature(object = "GEOData"): returns the column descriptions for the current object

Meta

signature(object = "GEOData"): returns the metadata for the current object

Table

signature(object = "GEOData"): returns the "Table" for the current object

dataTable

signature(object = "GEOData"): returns the dataTable (column info and data) for the current object

show

signature(object = "GEOData"): a convenience method for showing a GEO object

Author(s)

Sean Davis

See Also

GDS-class, GPL-class, GSM-class, GEODataTable-class,

ian1roberts/GEOquery documentation built on May 18, 2019, 1:27 a.m.