iantaylor-NOAA/Lingcod_2021 source listing

.Rbuildignore

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.gitignore

DESCRIPTION

NAMESPACE

data-raw/Albin_et_al_1993_Lingcod_rows.csv

data-raw/Lincod_2021_WCGOP_Discards_Strat1.xlsx

data-raw/Triennial_North_gamma/VASTWestCoast_scaledresidualsmap.png

data-raw/Triennial_South_gamma/VASTWestCoast_scaledresidualsmap.png

data-raw/WCGBTS_North_gamma/VASTWestCoast_scaledresidualsmap.png

data-raw/WCGBTS_South_gamma/VASTWestCoast_scaledresidualsmap.png

data-raw/catch_comm_north_2019structure.csv

data-raw/catch_comm_south_2019structure.csv

data/ageCAAL_N_FG.rda

data/ageCAAL_N_LamThesis.rda

data/ageCAAL_N_OR_Rec.rda

data/ageCAAL_N_TW.rda

data/ageCAAL_N_Triennial.rda

data/ageCAAL_N_WA_Rec.rda

data/ageCAAL_N_WCGBTS.rda

data/ageCAAL_S_FG.rda

data/ageCAAL_S_HKL.rda

data/ageCAAL_S_LamThesis.rda

data/ageCAAL_S_TW.rda

data/ageCAAL_S_Triennial.rda

data/ageCAAL_S_WCGBTS.rda

data/ageCompN_FG.rda

data/ageCompN_OR_Rec.rda

data/ageCompN_TW.rda

data/ageCompN_WA_Rec.rda

data/ageCompN_comm.rda

data/ageCompN_sex3_Triennial.rda

data/ageCompN_sex3_WCGBTS.rda

data/ageCompS_FG.rda

data/ageCompS_HKL.rda

data/ageCompS_TW.rda

data/ageCompS_comm.rda

data/ageCompS_sex3_Triennial.rda

data/ageCompS_sex3_WCGBTS.rda

data/bio.HKL.rda

data/bio.HKLage.Lam.rda

data/bio.Triennial.rda

data/bio.WCGBTS.rda

data/block_breaks_north.rda

data/block_breaks_south.rda

data/catch.Triennial.rda

data/catch.WCGBTS.rda

data/data_ageerror.rda

data/data_catch.rda

data/data_discard_rates_WCGOP.rda

data/data_index_cpue.rda

data/data_index_survey.rda

data/data_meanbodywt_N.rda

data/data_meanbodywt_S.rda

data/eez.rda

data/info_areacolors.rda

data/info_authors.rda

data/info_basemodels.rda

data/info_bins.rda

data/info_groups.rda

data/info_surveynames.rda

data/la.WCGBTS.rda

data/last_ssdat.rda

data/last_ssdir.rda

data/lenCompN_CA_Rec.rda

data/lenCompN_FG.rda

data/lenCompN_LamThesis.rda

data/lenCompN_OR_Rec.rda

data/lenCompN_TW.rda

data/lenCompN_WA_Rec.rda

data/lenCompN_comm.rda

data/lenCompN_comm_discards.rda

data/lenCompN_sex3_Triennial.rda

data/lenCompN_sex3_WCGBTS.rda

data/lenCompS_CA_Rec.rda

data/lenCompS_FG.rda

data/lenCompS_HKL.rda

data/lenCompS_LamThesis.rda

data/lenCompS_TW.rda

data/lenCompS_comm.rda

data/lenCompS_comm_discards.rda

data/lenCompS_debHist.rda

data/lenCompS_sex3_Triennial.rda

data/lenCompS_sex3_WCGBTS.rda

data/lw.WCGBTS.rda

doc/00opts.Rdata

doc/Lingcod.bib

doc/_bookdown_north.yml

doc/_bookdown_south.yml

doc/input_accessability.tex

doc/sa4ss.bib

doc/sa4ss.csl

doc/sa4ss.sty

doc/sa4ss_glossaries.tex

doc/tagged-filter.lua

docs/.nojekyll

docs/North/SPR1_series.png

docs/North/SPR2_minusSPRseries.png

docs/North/SPR3_ratiointerval.png

docs/North/SPR4_phase.png

docs/North/SR_curve.png

docs/North/SR_curve2.png

docs/North/SR_resids.png

docs/North/_SS_output.html

docs/North/_SS_output_A@LComp.html

docs/North/_SS_output_AgeComp.html

docs/North/_SS_output_Bio.html

docs/North/_SS_output_Catch.html

docs/North/_SS_output_CompDat.html

docs/North/_SS_output_Data.html

docs/North/_SS_output_DiagnosticTables.html

docs/North/_SS_output_Discard.html

docs/North/_SS_output_Index.html

docs/North/_SS_output_LenComp.html

docs/North/_SS_output_Mnwt.html

docs/North/_SS_output_Numbers.html

docs/North/_SS_output_Pars.html

docs/North/_SS_output_RecDev.html

docs/North/_SS_output_S-R.html

docs/North/_SS_output_SPR.html

docs/North/_SS_output_Sel.html

docs/North/_SS_output_Timeseries.html

docs/North/_SS_output_Yield.html

docs/North/bio10_spawningoutput_len.png

docs/North/bio11_spawningoutput_age.png

docs/North/bio1B_len_at_age_matrix_1.png

docs/North/bio1B_len_at_age_matrix_2.png

docs/North/bio1B_len_at_age_matrix_3.png

docs/North/bio1B_len_at_age_matrix_4.png

docs/North/bio1_sizeatage.png

docs/North/bio2_sizeatage_plus_CV_and_SD.png

docs/North/bio3_sizeatage_plus_WT_and_MAT.png

docs/North/bio5_weightatsize.png

docs/North/bio6_maturity.png

docs/North/bio7_fecundity.png

docs/North/bio8_fecundity_wt.png

docs/North/bio9_fecundity_len.png

docs/North/bodywt_data_fltcommercial fixed-gear.png

docs/North/bodywt_data_fltcommercial trawl.png

docs/North/bodywt_fit_fltcommercial fixed-gear.png

docs/North/bodywt_fit_fltcommercial trawl.png

docs/North/catch1 landings.png

docs/North/catch10 landings aggregated across seasons.png

docs/North/catch11 landings aggregated across seasons stacked.png

docs/North/catch12 total catch (if discards present) aggregated across seasons.png

docs/North/catch13 total catch (if discards present) aggregated across seasons stacked.png

docs/North/catch14 discards aggregated across seasons.png

docs/North/catch15 discards aggregated across seasons stacked.png

docs/North/catch16 landings + dead discards.png

docs/North/catch2 landings stacked.png

docs/North/catch3 observed and expected landings (if different).png

docs/North/catch4 total catch (including discards).png

docs/North/catch5 total catch (including discards) stacked.png

docs/North/catch6 discards.png

docs/North/catch7 discards stacked plot (depends on multiple fleets).png

docs/North/catch8 discard fraction.png

docs/North/catch9 harvest rate.png

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docs/North/comp_condAALdat_data_weighting_TA1.8_condAgeTriennial Survey.png

docs/North/comp_condAALdat_data_weighting_TA1.8_condAgeWCGBT Survey.png

docs/North/comp_condAALdat_data_weighting_TA1.8_condAgecommercial fixed-gear.png

docs/North/comp_condAALdat_data_weighting_TA1.8_condAgecommercial trawl.png

docs/North/comp_condAALdat_data_weighting_TA1.8_condAgerecreational Oregon.png

docs/North/comp_condAALdat_data_weighting_TA1.8_condAgerecreational Washington.png

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figures/STAR_requests10/sens_table_n_star.csv

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figures/Triennial - North _Age_Frequency.png

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figures/Triennial - North _age_fraction_female.png

figures/Triennial - North _length_fraction_female.png

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figures/Triennial - South _age_fraction_female.png

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figures/Triennial-maprawdata.png

figures/Triennial_cpueXdepth.png

figures/WA North _age_fraction_female.png

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iantaylor-NOAA/Lingcod_2021
Estimate the Status of Lingcod off the US West Coast in 2021

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Estimate the Status of Lingcod off the US West Coast in 2021

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iantaylor-NOAA/Lingcod_2021 Estimate the Status of Lingcod off the US West Coast in 2021

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iantaylor-NOAA/Lingcod_2021
Estimate the Status of Lingcod off the US West Coast in 2021

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Estimate the Status of Lingcod off the US West Coast in 2021