msy-package: Estimation of equilibrium reference points for fisheries

In ices-tools-prod/msy: Estimation of Equilibrium Reference Points for Fsisheries

Estimation of equilibrium reference points for fisheries

Description

Methods to estimate equilibrium reference points for fisheries data. Currently data must be converted into FLStock objects of the FLR (Fisheries Library in R) style, defined in the R package FLCore

Details

Model fitting and simulation:

eqsr_fit	fitting stock recruit models to data
eqsim_run	simulation am 'equilibrium' population state

Plotting:

eqsr_plot	plot stock recuitment fit
eqsim_plot	plot summary of simulation showing reference points
eqsim_plot_range	plot summary of MSY ranges reference points

Example data:

icesStocks	A list of various stocks

Author(s)

John Simmonds, Einar Hjorleifsson, Carmen Fernandez and Colin Millar.

References

ICES (2015) Report of the Workshop to consider F MSY ranges for stocks in ICES categories 1 and 2 in Western Waters (WKMSYREF4). 01 WKMSYREF4 Report.pdf

ICES (2017) ICES fisheries management reference points for category 1 and 2 stocks. DOI: 10.17895/ices.pub.3036

Buckland, S.T., K.P. Burnham & N.H. Augustin (1997). Model selection: An integral part of inference. Biometrics 53, 603-618. DOI: 10.2307/2533961

To explore the code of the package see the GitHub repo: ices-tools-prod/msy

ices-tools-prod/msy documentation built on Nov. 3, 2022, 6:41 p.m.