Files in idrblab/EVALFQ
R Package for Evaluating Label-Free Proteome Quantification
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/00evalfq.R
R/01evalfq.R
R/01evalfq_spiked.R
R/02evalfq_spiked.R
R/EIGENMS.R
R/FoldChange.R
R/PrepareInuputFiles.R
R/ROTS.R
R/RcppExports.R
R/allranks.R
R/biggerN.R
R/bootstrapSamples.R
R/calculateFDR.R
R/calculateOverlaps1.R
R/calculateOverlaps2.R
R/calculateP.R
R/editcolnames.R
R/evalfq.R
R/evalfq_spiked.R
R/evalfqpart.R
R/evalfqspikedpart.R
R/evaluation.R
R/fastlo.R
R/global.R
R/lfqvisualize.R
R/lowess.R
R/my_df.R
R/my_spiked.R
R/overLapper.R
R/permutatedSamples.R
R/preprocess.R
R/selectworkflows.R
R/spiked_data.R
R/summary.ROTS.R
R/sysdata.rda
R/testStatistic.R
R/tmm.R
README.md
build/vignette.rds
data/allranks.rda
data/my_df.rda
data/my_spiked.rda
data/selectworkflows.rda
data/spiked_data.rda
inst/doc/EVALFQ-vignette.R
inst/doc/EVALFQ-vignette.Rmd
inst/doc/EVALFQ-vignette.html
man/EIGENMS.Rd
man/PrepareInuputFiles.Rd
man/allranks.Rd
man/lfqevalueall.Rd
man/lfqevalueall0.Rd
man/lfqevalueall3.Rd
man/lfqevalupart.Rd
man/lfqspikedall.Rd
man/lfqspikedall1.Rd
man/lfqspikedall4.Rd
man/lfqspikepart.Rd
man/lfqvisualize.Rd
man/my_df.Rd
man/my_spiked.Rd
man/selectworkflows.Rd
man/spiked_data.Rd
src/NeedForSpeed1.cpp
src/NeedForSpeed2.cpp
src/RcppExports.cpp
src/pvalue.cpp
vignettes/EVALFQ-vignette.Rmd
