Description Usage Arguments Value Author(s) References See Also
For internal use only.
1 | bm_loglik_trio(a, v, d1, d2, s, t1, t2, sigma2x, sigma2y, areas, daughter_ids, nGQ)
|
a |
vector with ancestor value (x & y). |
v |
vector with current point being evaluated (x & y). |
d1 |
vector with first daughter value (x & y). |
d2 |
vector with second daughter value (x & y). |
s |
time separating |
t1 |
time separating |
t2 |
time separating |
sigma2x |
current value for sigma2x. |
sigma2y |
current value for sigma2y. |
areas |
polygonal areas, to save time and not recalculate. |
daughter_ids |
the ids of the daughters of the node. |
nGQ |
degree of the one-dimensional Gauss-Legendre quadrature rule (default = 20) as given by |
loglikelihood of v according to Brownian motion.
Forrest Crawford, Ignacio Quintero
Quintero, I., Keil, P., Jetz, W., Crawford, F. W. 2015 Historical Biogeography Using Species Geographical Ranges. Systematic Biology. doi: 10.1093/sysbio/syv057
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