graph.motifs.est: Graph motifs

View source: R/motifs.R

graph.motifs.estR Documentation

Graph motifs

Description

[Deprecated]

graph.motifs.est() was renamed to sample_motifs() to create a more consistent API.

Usage

graph.motifs.est(
  graph,
  size = 3,
  cut.prob = rep(0, size),
  sample.size = vcount(graph)/10,
  sample = NULL
)

Arguments

graph

Graph object, the input graph.

size

The size of the motif, currently size 3 and 4 are supported in directed graphs and sizes 3-6 in undirected graphs.

cut.prob

Numeric vector giving the probabilities that the search graph is cut at a certain level. Its length should be the same as the size of the motif (the size argument). By default no cuts are made.

sample.size

The number of vertices to use as a starting point for finding motifs. Only used if the sample argument is NULL.

sample

If not NULL then it specifies the vertices to use as a starting point for finding motifs.


igraph/rigraph documentation built on May 19, 2024, 6:19 a.m.