cnv.methyl-package: cnv.methyl: cnv.methyl finds copy number alteration from...
In ijcBIT/cnv.methyl: cnv.methyl finds copy number alteration from methylation idat files
cnv.methyl-package R Documentation
cnv.methyl: cnv.methyl finds copy number alteration from methylation idat files
Description
The package implements an automatic and dynamic thresholding algorithm to find somatic copy number alterations in methylation arrays based on log2R intensities. It relies mostly on minfi for preprocessing and and conumee for segmentation.
Author(s)
Maintainer: Izar Llaquet de Villasante idevillasante@carrerasresearch.org (ORCID)
ijcBIT/cnv.methyl documentation built on Jan. 10, 2023, 7:51 a.m.
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| cnv.methyl-package | R Documentation |
cnv.methyl: cnv.methyl finds copy number alteration from methylation idat files
Description
The package implements an automatic and dynamic thresholding algorithm to find somatic copy number alterations in methylation arrays based on log2R intensities. It relies mostly on minfi for preprocessing and and conumee for segmentation.
Author(s)
Maintainer: Izar Llaquet de Villasante idevillasante@carrerasresearch.org (ORCID)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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