createPhyloCRBD: Create one phylogeny under the CRBD model
In ilajaait/deephylo: Infer Parameters from Phylogenies with Deep-Learning
View source: R/simulatePhylogenies.R
createPhyloCRBD R Documentation
Create one phylogeny under the CRBD model
Description
Speciation and extinction rates are constant through time and lineages.
Usage
createPhyloCRBD(n.tips, params)
Arguments
n.tips
number of tips
params
list
-
$lambda: speciation rate
-
$mu: extinction rate
Value
phylogeny (ape format)
Examples
n.tips <- 10 # 10 extant species
lambda <- 1 # speciation rate
mu <- 0 # extinction rate
createPhyloCRBD(n.tips, list(lambda = lambda, mu = mu))
ilajaait/deephylo documentation built on April 10, 2022, 11:03 a.m.
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View source: R/simulatePhylogenies.R
| createPhyloCRBD | R Documentation |
Create one phylogeny under the CRBD model
Description
Speciation and extinction rates are constant through time and lineages.
Usage
createPhyloCRBD(n.tips, params)
Arguments
n.tips |
number of tips |
params |
list
|
Value
phylogeny (ape format)
Examples
n.tips <- 10 # 10 extant species lambda <- 1 # speciation rate mu <- 0 # extinction rate createPhyloCRBD(n.tips, list(lambda = lambda, mu = mu))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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