Description Usage Arguments Details Value Examples
Convert the peaks called by spp
to a GRanges
object.
1 | sppPeaksToGRanges(peaks)
|
peaks |
Output of |
sppPeaksToGRanges()
takes the output of
find.binding.positions()
from the spp
package and converts it
into a GRanges
object.
spp
data converted to GRanges
object.
1 2 3 | bc <- calculateBindingCharacteristics("IP.bam", "input.bam")
peaks <- callPeaks(bc$chip.data, bc$input.data, bc$bc)
sppPeaksToGRanges(peaks)
|
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