Man pages for immunogenomics/harmony
Fast, Sensitive, and Accurate Integration of Single Cell Data

cell_linesList of metadata table and scaled PCs matrix
cell_lines_smallSame as cell_lines but smaller (300 cells).
harmonyHarmony: fast, accurate, and robust single cell integration.
harmony_optionsSet advanced options for RunHarmony
moe_ridge_get_betasGet beta Utility
pipePipe operator
RunHarmonyGeneric function that runs the harmony algorithm on...
RunHarmony.defaultThis is the primary harmony interface.
RunHarmony.SeuratApplies harmony on a Seurat object cell embedding.
RunHarmony.SingleCellExperimentApplies harmony on PCA cell embeddings of a...
immunogenomics/harmony documentation built on Nov. 16, 2023, 12:19 a.m.