manifest_yaml_to_bash: Convert a manifest yaml file into a bash script

In inbo/n2kanalysis: Generic Functions to Analyse Data from the 'Natura 2000' Monitoring

Convert a manifest yaml file into a bash script

Description

Convert a manifest yaml file into a bash script

Usage

manifest_yaml_to_bash(
  base,
  project,
  hash,
  shutdown = FALSE,
  split = 1,
  status = c("new", "waiting"),
  limit = FALSE,
  timeout = 4
)

## S4 method for signature 's3_bucket'
manifest_yaml_to_bash(
  base,
  project,
  hash,
  shutdown = FALSE,
  split = 1,
  status = c("new", "waiting"),
  limit = FALSE,
  timeout = 4
)

## S4 method for signature 'character'
manifest_yaml_to_bash(
  base,
  project,
  hash,
  shutdown = FALSE,
  split = 1,
  status = c("new", "waiting"),
  limit = FALSE,
  timeout = 4
)

Arguments

base	the base location to store the manifest
project	will be a relative path within the base location
hash	Fingerprint of the manifest yamlfile.
shutdown	Append a shutdown command at the end of the script. Defaults to FALSE.
split	Number of scripts over which to splits the analyses. Default to 1.
status	A vector with status levels naming the levels which should be calculated. Defaults to c("new", "waiting").
limit	Limit bandwidth and CPU usage. Defaults to FALSE.
timeout	number of hours to time out the docker container. Defaults to 4.

inbo/n2kanalysis documentation built on Feb. 1, 2025, 12:02 a.m.