Man pages for insilico/npdro
Nearest-neighbor Projected-Distance Regression Optimized
| attr.range | =========================================================================#... |
| auPRC | auPRC |
| case.control.3sets | case-control interaction effect data |
| consensus_nestedCV | consensus_nestedCV Consensus nested cross validation for... |
| createfMRIsimulation | createfMRIsimulation |
| createMainEffects | Create a simulated data set with main effects |
| createSimulation2 | createSimulation2 update to createSimulation2() that allows... |
| dcgain | Differential coexpression genetic association interaction... |
| detected | detected |
| detectionStats | detectionStats |
| diffRegression | diffRegression |
| dmgain | Differential modularity genetic association network algorithm... |
| fitInteractionModel | Get the interaction effect of a pair of variables using... |
| fitMainEffectModel | Get the main effect of a variable using generalized linear... |
| gainToSimpleSIF | GAIN matrix to simple interaction format (SIF) converter. |
| geneLowVarianceFilter | geneLowVarianceFilter |
| generate_structured_corrmat | generate_structured_corrmat |
| getInteractionEffects | Get interaction effects from generalized linear model... |
| getMainEffects | Get main effects from generalized linear model regression... |
| hamming.binary | Hamming distance for a binary matrix... |
| knnSURF | knnSURF |
| knnVec | knnVec |
| make_big_case_ctrl_mat | make_big_case_ctrl_mat Makes a big matrix containing all case... |
| make_case_ctrl_corrs | make_case_ctrl_corrs |
| make_sim_plot | make_sim_plot |
| mdd.RNAseq.small | RNA-Seq from the paper referenced below. |
| nearestNeighbors | nearestNeighbors |
| nearestNeighbors2 | nearestNeighbors2 |
| nearestNeighborsSeparateHitMiss | nearestNeighborsSeparateHitMiss |
| npdr | npdr |
| npdrDiff | npdrDiff |
| npdrDistances | npdrDistances |
| npdrDistances2 | npdrDistances2 |
| npdrLearner | npdrLearner |
| predictors.mat | case-control interaction effect data, features only |
| qtrait.3sets | quantitative trait main effect data |
| regain | Front end to the reGAIN algorithm. |
| regainParallel | Parallel execution of the regression genetic association... |
| splitDataset | Split a data set for machine learning classification |
| testdata10 | Test data from Rinbix |
| uniqueNeighbors | uniqueNeighbors |
| uniReg | uniReg |
| vwok | vwok |
