convertToGeneAnswers | Convert InterMineR enrichment analysis results to GeneAnswers... |
convertToGRanges | Convert InterMineR retrieved genomic information to objects... |
convertToRangedSummarizedExperiment | Convert experimental results retrieved by InterMineR queries... |
doEnrichment | Perform enrichment analysis |
getDatasets | Retrieve information about the available datasets of a Mine... |
getGeneIds | Get Gene.id values for a list of gene identifiers |
getModel | Get the model of InterMine |
getRelease | Get the current release information of InterMine |
getTemplateQuery | Get the query contained in a template |
getTemplates | Get the information (name and title) of the templates... |
getVersion | Get the version information of InterMine |
getWidgets | Get the widgets of InterMine |
initInterMine | Initialize the list containing the base URL and API token. |
InterMineR-class | InterMineR class contains the input values for performing... |
InterMineR-methods | Methods for accessing 'InterMineR-class' objects. |
InterMineR-package | R Interface with InterMine-powered databases |
listDatasets | Retrieve all types of InterMine features that possess... |
list_manager | A Class for Managing List Content and Operations |
ListManager-class | ListManager class provides methods to manage list contents... |
ListManager-methods | Methods for managing and doing operations with... |
listMines | List the available InterMine-powered databases |
newQuery | Initialize a new list query |
PL_DiabetesGenes | PL_DiabetesGenes data |
PL_FlyTF_site_specific_TFs | PL_FlyTF_site_specific_TFs data |
runQuery | Run InterMineR queries |
setConstraints | setConstraints function is used to create a new or modify an... |
setQuery | Initialize a new InterMineR query or modify an existing list... |
simplifyResult | Convert multiple values of a column into Comma-separated... |
summary | Summarize InterMineR query constraints |
webservice-class | Service class represents connections to different InterMine... |
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