getWidgets: Get the widgets of InterMine

Description Usage Arguments Value Note Author(s) See Also Examples

View source: R/getWidgets.R

Description

Returns a representation of the available widgets for the mine. Each entry for the widget includes details of its type, the kind of data it processes, and any filters it accepts.

Usage

1

Arguments

im

a Service object containing the base URL and API token, created by initInterMine.

Value

A data.frame containing information about the widgets that are available for each mine.

Note

The names of the widgets of the enrichment type can be passed as arguments to doEnrichment function.

Author(s)

InterMine Team

See Also

getGeneIds, doEnrichment

Examples

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# Get available FlyMine widgets
FlyMine.widgets <- getWidgets(im = initInterMine(mine = listMines()["FlyMine"]))
# Get available HumanMine widgets
HumanMine.widgets <- getWidgets(im = initInterMine(mine = listMines()["HumanMine"]))

intermine/rintermine documentation built on May 12, 2021, 2:45 a.m.