Plots results from oh.pca Uses the variables in the metadata (Map) to color or shape the ggplot based graph.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 | chibi.pca(
list_ohpca = NULL,
col_val = NULL,
shape_val = NULL,
comp_a = "PC1",
comp_b = "PC2",
mypch = 21,
size = 25,
alpha = 1,
stroke = 1.5,
col_shape_background = "white",
alpha_shape_background = 0,
lines_zero = TRUE,
size_axis_line = 0.5,
type_axis_line = "longdash",
ratio_size_shape_background = 1.3,
y_vjust = 0.5,
x_hjust = 0.5,
size_axis_text = 20,
size_axis_title = 30,
size_legend_text = 20,
size_title_text = 30,
legend_proportion_size = 2,
size_lines_panel = 0,
size_panel_border = 1,
font_family = "Arial"
)
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