API for isglobal-brge/CTDquerier
Package for CTDbase data query, visualization and downstream analysis
| Global functions | |
|---|---|
| .get_cache | Source code |
| CTDdata | Man page |
| CTDdata-class | Man page |
| CTDquerier | Man page |
| create_empty_data | Source code |
| download_ctd_chem | Man page Source code |
| download_ctd_dise | Man page Source code |
| download_ctd_genes | Man page Source code |
| download_url | Source code |
| enrich | Man page |
| enrich,CTDdata-method | Man page |
| gala | Man page |
| get_ctd_url | Source code |
| get_table | Man page |
| get_table,CTDdata-method | Man page |
| get_terms | Man page |
| get_terms,CTDdata-method | Man page |
| in_plot_base | Source code |
| int_plot_chem_disease_heatmap | Source code |
| int_plot_chem_gene_heatmap | Source code |
| int_plot_chem_gene_network | Source code |
| int_plot_chem_go_heatmap | Source code |
| int_plot_chem_kegg_heatmap | Source code |
| int_plot_dise_gene_heatmap | Source code |
| int_plot_dise_kegg_network | Source code |
| int_plot_disease_chemical_heatmap | Source code |
| int_plot_gene_chemical_heatmap | Source code |
| int_plot_gene_disease_heatmap | Source code |
| int_plot_gene_gene_heatmap | Source code |
| int_plot_gene_gene_network | Source code |
| int_plot_gene_go_network | Source code |
| int_plot_gene_kegg_network | Source code |
| leaf_plot | Man page Source code |
| load_ctd_chem | Man page Source code |
| load_ctd_dise | Man page Source code |
| load_ctd_gene | Man page Source code |
| plot,CTDdata,ANY-method | Man page |
| prepare_ctd_chem | Source code |
| prepare_ctd_disease | Source code |
| prepare_ctd_gene | Source code |
| query_ctd_chem | Man page Source code |
| query_ctd_dise | Man page Source code |
| query_ctd_gene | Man page Source code |
