Man pages for isglobal-brge/dsExposomeClient
DataSHIELD client site Exposome functions
| checkForExposomeSet | Check if object exists on the study server and if it's an... |
| checkForExposure | Check if exposure exists inside an ExposomeSet |
| circos_corPlotEXP | Draws correlation circos plot |
| corPlot | Draws correlation plot |
| ds.addPhenoData2ExposomeSet | Add Phenotype data to ExpressionSet |
| ds.anderson.darling.test | Anderson-Darling Normality Test |
| ds.boxPlotGG | Renders boxplot |
| ds.exposome_correlation | Extract correlation matrix from Exposome Set exposures |
| ds.exposome_HCPC | Hierarchical clustering on principal components |
| ds.exposome_pca | Principal components analysis of an Exposome Set |
| ds.exposome_pca_plot | Plot an ExposomeSet PCA |
| ds.exposome_scale_exposures | Scale ExposomeSet |
| ds.exposomeSubset | Subset Exposome Set by familie(s) |
| ds.exposome_summary | Generate the summary of a variable of an exposome dataset |
| ds.exposome_variables | Get names from the exposures or phenotypes of an Exposome Set... |
| ds.exposure_histogram | Draw histogram for Exposome Set exposure |
| ds.exposures_pData | Extract exposure or phenotype data and save them to a data... |
| ds.extractExposomeSetFromImputedSet | Extract ExposomeSet from imExposomeSet |
| ds.exwas | Performs a non-disclosive EXposome-Wide Association Study |
| ds.familyNames | Get family names from Exposome Set |
| ds.get_exposure_from_geo | Associate 'NetCDF' data and individual location |
| ds.imputation | Perform a imputation of an Exposome Set |
| ds.invExWAS | Performs a non-disclosive Inverse EXposome-Wide Association... |
| ds.loadExposome | Create an ExposomeSet from 'data.frames' |
| ds.ncatt_get | Get attribute from netCDF file |
| ds.ncvar_get | Read data from netCDF file |
| ds.NetCDF_fillvalue_matrix | Set NAs to matrix fillvalues |
| ds.netcdf_vars | Get variable names of NetCDF object |
| ds.normalityTest | Normality test of exposures of ExposomeSet |
| ds.phenotypeNames | Exposure Phenotype names |
| ds.plotExwas | Plot ExWAS results |
| ds.plotFamily | Draw boxplot of a family of an Exposome Set of the server... |
| ds.plotMissings | Draw plot with percentage of missings |
| ds.shapiro.test | Shapiro-Wilk Normality Test |
| ds.standardize | Standardize ExposomeSet |
| ds.tableMissings | Get table of missings per variable |
| ds.transform | Apply a transformation to the exposure of an ExposomeSet |
| exwasplotF | ExWAS plotter |
| matrix_corPlotEXP | Draws correlation matrix plot |
