ds.get_exposure_from_geo: Associate 'NetCDF' data and individual location
In isglobal-brge/dsExposomeClient: DataSHIELD client site Exposome functions

View source: R/ds.get_exposure_from_geo.R

ds.get_exposure_from_geo

R Documentation

Associate 'NetCDF' data and individual location

Description

Merge the exposure data contained in a 'NetCDF' object with the location data of the individuals present on a 'clinical' 'data.frame'

Usage

ds.get_exposure_from_geo(
  lat,
  lon,
  exposure,
  exposure_name,
  clinical,
  clinical_lat_var,
  clinical_lon_var,
  clinical_id_var,
  exposures = NULL,
  exposures_id_var = NULL,
  new.obj = "exposures",
  datasources = NULL
)

Arguments

`lat`	'character' (Object server name of: ) Latitude extracted from a 'NetCDF' resource using 'ncvar_getDS'
`lon`	'character' (Object server name of: ) Longitutde extracted from a 'NetCDF' resource using 'ncvar_getDS'
`exposure`	'character' (Object server name of: ) Exposure extracted from a 'NetCDF' resource using 'ncvar_getDS'
`exposure_name`	'character' Name to assign to the 'exposure'
`clinical`	'character' (Object server name of: ) Clinical data data of the individuals, which contain among other variables, the longitude and latitude of the individuals to be associated with the 'NetCDF' data.
`clinical_lat_var`	'character' Name of the latitude variable on the 'clinical' data
`clinical_lon_var`	'character' Name of the longitude variable on the 'clinical' data
`clinical_id_var`	'character' Name of the IDs variable on the 'clinical' data
`exposures`	(default 'NULL') (Object server name of: ) If provided, existing 'data.frame' with exposure data. The new exposure calculated from the 'NetCDF' data will be added to this table by ID
`exposures_id_var`	(default 'NULL') Required if 'exposures' is provided. Name of the IDs variable on the 'exposures' data.