Files in isglobal-brge/epimutacions
Robust outlier identification for DNA methylation data
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/GRset.R
R/add_ensemble_regulatory.R
R/annotate_cpg.R
R/annotate_epimutations.R
R/betas_from_bump.R
R/epi_beta.R
R/epi_iForest.R
R/epi_mahdist.R
R/epi_manova.R
R/epi_mlm.R
R/epi_parameters.R
R/epi_pca_correction.R
R/epi_plot.R
R/epi_preprocess.R
R/epi_quantile.R
R/epimutations.R
R/epimutations_one_leave_out.R
R/get_candRegsGR.R
R/globals.R
R/mlm.R
R/mlmtst.R
R/norm_parameters.R
R/plot_epimutations.R
R/pv.R
R/res.epi.manova.R
README.md
data/GRset.rda
data/res.epi.manova.rda
inst/CITATION
inst/pkgdown/templates/_pkgdown.yml
inst/scripts/getEffectiveNumberTest.R
logo.png
man/AS204.Rd
man/GRset.Rd
man/UCSC_annotation.Rd
man/UCSC_regulation.Rd
man/add_ensemble_regulatory.Rd
man/annotate_cpg.Rd
man/annotate_epimutations.Rd
man/betas_from_bump.Rd
man/betas_sd_mean.Rd
man/cols_names.Rd
man/create_GRanges_class.Rd
man/epi_beta.Rd
man/epi_iForest.Rd
man/epi_mahdist.Rd
man/epi_manova.Rd
man/epi_mlm.Rd
man/epi_parameters.Rd
man/epi_preprocess.Rd
man/epi_quantile.Rd
man/epimutations.Rd
man/epimutations_one_leave_out.Rd
man/getBetaParams.Rd
man/get_ENSEMBL_data.Rd
man/get_candRegsGR.Rd
man/merge_records.Rd
man/mlm.Rd
man/mlmtst.Rd
man/norm_parameters.Rd
man/p.asympt.Rd
man/plot_epimutations.Rd
man/process_ENSEMBL_results.Rd
man/res.epi.manova.Rd
man/res_iForest.Rd
man/res_mahdist.Rd
man/res_manova.Rd
man/res_mlm.Rd
src/mlm_init.c
src/ruben.cpp
tests/testthat.R
tests/testthat/init_data.R
tests/testthat/test-epimutations.R
vignettes/epimutacions.Rmd
vignettes/fig/gvizGenesannot.png
vignettes/fig/gvizRegulation.png
vignettes/fig/implementation.png
vignettes/fig/workflow.png
vignettes/refs.bib
