res_iForest: Creates a data frame containing the results obtained from...

View source: R/epi_iForest.R

res_iForestR Documentation

Creates a data frame containing the results obtained from Isolation Forest

Description

Creates a data frame containing the genomic regions, statistics and direction for the DMRs.

Usage

res_iForest(bump, sts, outlier_score_cutoff)

Arguments

bump

a DMR obtained from bumphunter (i.e. a row from bumphunter method result).

sts

the outlier score from epi_iForest function results.

outlier_score_cutoff

numeric specifying the outlier score cut off

Value

The function returns a data frame containing the following information for each DMR:

  • genomic ranges

  • DMR base pairs

  • number and name of CpGs in DMR

  • statistics:

    • Outlier score

    • Outlier significance

    • Outlier direction

  • Sample name

For more information about the output see epimutations.


isglobal-brge/epimutacions documentation built on April 22, 2024, 4:08 a.m.