SSplotKobe: KOBE phase plot
In jabbamodel/ss3diags: What the Package Does (One Line, Title Case)

SSplotKobe

R Documentation

KOBE phase plot

Description

plots the stock status uncertaint over SSB/SSBmsy and F/Fmsy

Usage

SSplotKobe(
  kb,
  joint = TRUE,
  year = NULL,
  posterior = c("points", "kernel"),
  ci.levels = c(0.5, 0.8, 0.95),
  path = TRUE,
  xlab = expression(SSB/SSB[MSY]),
  ylab = expression(F/F[MSY]),
  pt.cex = 0.8,
  ylim = NULL,
  xlim = NULL,
  fill = TRUE,
  legend = TRUE,
  legendpos = "right",
  legendcex = 0.7,
  legendruns = TRUE,
  yr.label = TRUE,
  yr.int = 5,
  verbose = TRUE
)

Arguments

`kb`	output from SSdeltaMVLN()$kb
`joint`	option FALSE shows individual runs
`year`	option to choose year for kobe, last year is default
`posterior`	visualization of posterior c("points","kernel")
`ci.levels`	option for kernel with default ci.levels=c(0.50,0.80,0.95)
`path`	shows historical years
`xlab`	graphic parameter
`ylab`	graphic parameter
`pt.cex`	option change relative size of points (default 0.8)
`ylim`	graphic parameter
`xlim`	graphic parameter
`fill`	shows color-coded quadrants
`legend`	graphic parameter
`legendpos`	legend position
`legendcex`	lengend size
`legendruns`	show legend for run lables
`yr.label`	show year along trajectory
`yr.int`	= year interval along trajectory
`verbose`